Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine decarboxylase | DBR11_22400 | Not Available | Negative | 5425777 - 5426928 | 42954.4 |
| hypothetical protein | DBR11_22405 | Not Available | Positive | 5427107 - 5428171 | 39843.2 |
| proline hydroxylase | DBR11_22410 | Not Available | Positive | 5428234 - 5428824 | 22906.2 |
| duf2795 domain-containing protein | DBR11_22415 | Not Available | Positive | 5428944 - 5429165 | 8587.66 |
| lmo0937 family membrane protein | DBR11_22420 | Not Available | Positive | 5429287 - 5429445 | 5630.43 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DBR11_22425 | Not Available | Negative | 5429471 - 5430145 | 25523.8 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DBR11_22430 | Not Available | Negative | 5430232 - 5431277 | 39726.7 |
| hypothetical protein | DBR11_22435 | Not Available | Negative | 5431278 - 5434175 | 106474.0 |
| anti-sigma factor | DBR11_22440 | Not Available | Negative | 5434404 - 5435540 | 42657.6 |
| rna polymerase subunit sigma-70 | DBR11_22445 | Not Available | Negative | 5435634 - 5436218 | 22983.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

