Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m42 | DBR11_22350 | Not Available | Negative | 5412533 - 5413645 | 41609.7 |
| n-acetyltransferase | DBR11_22355 | Not Available | Negative | 5413650 - 5414069 | 15926.0 |
| mfs transporter | DBR11_22360 | Not Available | Negative | 5414071 - 5415231 | 42214.9 |
| methylmalonyl-coa carboxyltransferase | DBR11_22365 | Not Available | Negative | 5415232 - 5416773 | 56064.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DBR11_22370 | Not Available | Positive | 5416882 - 5418840 | 72477.2 |
| is110 family transposase | DBR11_22375 | Not Available | Negative | 5419210 - 5420265 | 40378.3 |
| is110 family transposase | DBR11_22380 | Not Available | Negative | 5420446 - 5421498 | 40637.5 |
| merr family transcriptional regulator | DBR11_22385 | Not Available | Negative | 5421639 - 5421905 | 10476.6 |
| alanine--trna ligase | DBR11_22390 | Not Available | Positive | 5422022 - 5424721 | 101512.0 |
| hypothetical protein | DBR11_22395 | Not Available | Positive | 5424726 - 5425712 | 37162.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

