Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-independent coproporphyrinogen iii oxidase | DBR11_22300 | Not Available | Positive | 5400930 - 5402303 | 52345.7 |
| sulfite exporter taue/safe family protein | DBR11_22305 | Not Available | Negative | 5402309 - 5402995 | 24748.3 |
| nitrogen fixation protein fixh | DBR11_22310 | Not Available | Negative | 5402995 - 5403423 | 16484.1 |
| cytochrome c oxidase accessory protein ccog | DBR11_22315 | Not Available | Negative | 5403428 - 5404825 | 53359.9 |
| cytochrome c | DBR11_22320 | Not Available | Negative | 5404828 - 5405631 | 29560.7 |
| cytochrome c oxidase cbb3 | DBR11_22325 | Not Available | Negative | 5405812 - 5407923 | 80304.2 |
| cbb3-type cytochrome oxidase assembly protein ccos | DBR11_22330 | Not Available | Negative | 5407999 - 5408181 | 6931.36 |
| heavy metal translocating p-type atpase | DBR11_22335 | Not Available | Negative | 5408178 - 5410577 | 89360.3 |
| hypothetical protein | DBR11_22340 | Not Available | Positive | 5410723 - 5411361 | 23870.8 |
| hydroxyacid dehydrogenase | DBR11_22345 | Not Available | Negative | 5411402 - 5412448 | 38224.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

