Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor | DBR11_22145 | Not Available | Positive | 5367949 - 5369100 | 43178.4 |
| susc/raga family tonb-linked outer membrane protein | DBR11_22150 | Not Available | Positive | 5369268 - 5369666 | 15801.3 |
| tail-specific protease | DBR11_22155 | Not Available | Positive | 5369733 - 5371877 | 79466.4 |
| protease | DBR11_22160 | Not Available | Negative | 5371947 - 5372876 | 34737.0 |
| peptidase m13 | DBR11_22165 | Not Available | Positive | 5373059 - 5375104 | 77249.8 |
| hypothetical protein | DBR11_22170 | Not Available | Positive | 5375119 - 5375352 | 8735.69 |
| capsule biosynthesis protein capa | DBR11_22175 | Not Available | Negative | 5375450 - 5376574 | 40590.5 |
| glycoside hydrolase | DBR11_22180 | Not Available | Negative | 5376639 - 5377193 | 20869.1 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | DBR11_22185 | Not Available | Positive | 5377510 - 5378505 | 37009.2 |
| pyruvate dehydrogenase | DBR11_22190 | Not Available | Positive | 5378535 - 5380190 | 57607.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

