Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DBR11_22095 | Not Available | Positive | 5352450 - 5355554 | 114278.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_22100 | Not Available | Positive | 5355563 - 5357080 | 56602.7 |
| glycoside hydrolase family 92 protein | DBR11_22105 | Not Available | Positive | 5357168 - 5359453 | 86044.2 |
| glycoside hydrolase family 95 | DBR11_22110 | Not Available | Positive | 5359460 - 5361655 | 82667.6 |
| sialate o-acetylesterase | DBR11_22115 | Not Available | Positive | 5361663 - 5363129 | 54991.7 |
| hypothetical protein | DBR11_22120 | Not Available | Positive | 5363174 - 5363575 | 16072.4 |
| marr family transcriptional regulator | DBR11_22125 | Not Available | Positive | 5363614 - 5364558 | 36072.5 |
| transketolase | DBR11_22130 | Not Available | Positive | 5364559 - 5366012 | 53068.4 |
| ribose-5-phosphate isomerase | DBR11_22135 | Not Available | Positive | 5366023 - 5366478 | 16174.3 |
| hydrolase | DBR11_22140 | Not Available | Positive | 5366503 - 5367141 | 24855.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

