Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_22045 | Not Available | Positive | 5337314 - 5338770 | 55580.7 |
| rna polymerase subunit sigma-70 | DBR11_22050 | Not Available | Positive | 5338861 - 5339466 | 23958.1 |
| iron dicitrate transport regulator fecr | DBR11_22055 | Not Available | Positive | 5339549 - 5340760 | 45521.4 |
| susc/raga family protein | DBR11_22060 | Not Available | Positive | 5340911 - 5344537 | 135262.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_22065 | Not Available | Positive | 5344549 - 5346003 | 54149.2 |
| hypothetical protein | DBR11_22070 | Not Available | Positive | 5346020 - 5347336 | 48289.2 |
| hypothetical protein | DBR11_22075 | Not Available | Positive | 5347359 - 5348684 | 47890.8 |
| hypothetical protein | DBR11_22080 | Not Available | Positive | 5348697 - 5348912 | 8086.83 |
| l,d-transpeptidase | DBR11_22085 | Not Available | Positive | 5349114 - 5350586 | 56243.9 |
| glutamate/aspartate:proton symporter gltp | DBR11_22090 | Not Available | Negative | 5350621 - 5351877 | 45806.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

