Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-24 | DBR11_21480 | Not Available | Negative | 5195681 - 5196262 | 22737.6 |
| hypothetical protein | DBR11_21485 | Not Available | Negative | 5196421 - 5197395 | 36904.6 |
| hypothetical protein | DBR11_21490 | Not Available | Negative | 5197504 - 5198082 | 22828.2 |
| hypothetical protein | DBR11_21495 | Not Available | Positive | 5198389 - 5199543 | 44175.4 |
| acyltransferase | DBR11_21500 | Not Available | Positive | 5199614 - 5200717 | 41715.5 |
| peptidase | DBR11_21505 | Not Available | Negative | 5200784 - 5203525 | 102021.0 |
| hypothetical protein | DBR11_21510 | Not Available | Negative | 5203558 - 5204847 | 48433.9 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_21515 | Not Available | Negative | 5204798 - 5206336 | 57580.4 |
| susc/raga family tonb-linked outer membrane protein | DBR11_21520 | Not Available | Negative | 5206342 - 5209785 | 127428.0 |
| anti-sigma factor | DBR11_21525 | Not Available | Negative | 5209925 - 5211130 | 44431.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

