Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DBR11_21230 | Not Available | Positive | 5136078 - 5137481 | 53881.6 |
| atp/gtp-binding protein | DBR11_21235 | Not Available | Positive | 5137492 - 5138595 | 41138.5 |
| duf5007 domain-containing protein | DBR11_21240 | Not Available | Positive | 5138616 - 5139719 | 42116.0 |
| susc/raga family tonb-linked outer membrane protein | DBR11_21245 | Not Available | Positive | 5139763 - 5142873 | 114410.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_21250 | Not Available | Positive | 5142886 - 5144454 | 59703.7 |
| hypothetical protein | DBR11_21255 | Not Available | Positive | 5144579 - 5145307 | 27420.1 |
| hypothetical protein | DBR11_21260 | Not Available | Positive | 5145313 - 5146959 | 59395.7 |
| hypothetical protein | DBR11_21265 | Not Available | Positive | 5146907 - 5148694 | 66183.1 |
| hypothetical protein | DBR11_21270 | Not Available | Positive | 5148723 - 5150141 | 51556.8 |
| hypothetical protein | DBR11_21275 | Not Available | Positive | 5150182 - 5151210 | 38380.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

