Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_21125 | Not Available | Negative | 5102335 - 5106827 | 161931.0 |
| yihy/virulence factor brkb family protein | DBR11_21130 | Not Available | Negative | 5107020 - 5107988 | 37071.5 |
| endolytic transglycosylase mltg | DBR11_21135 | Not Available | Negative | 5108075 - 5109127 | 40113.8 |
| serine/threonine protein kinase | DBR11_21140 | Not Available | Negative | 5109148 - 5109918 | 28091.1 |
| d-alanine--d-alanine ligase | DBR11_21145 | Not Available | Positive | 5110138 - 5111124 | 36505.9 |
| mate family efflux transporter | DBR11_21150 | Not Available | Negative | 5111187 - 5112614 | 51367.4 |
| thioesterase | DBR11_21155 | Not Available | Negative | 5112838 - 5113257 | 16327.7 |
| 30s ribosomal protein s15 | DBR11_21160 | Not Available | Positive | 5113377 - 5113655 | 10676.2 |
| polyribonucleotide nucleotidyltransferase | DBR11_21165 | Not Available | Positive | 5113771 - 5115915 | 78176.2 |
| ribulose-phosphate 3-epimerase | DBR11_21170 | Not Available | Positive | 5115997 - 5116668 | 24155.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

