Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | DBR11_21080 | Not Available | Negative | 5093194 - 5095743 | 95225.5 |
| lactate utilization protein b/c | DBR11_21085 | Not Available | Negative | 5095740 - 5096357 | 23329.2 |
| 4fe-4s ferredoxin | DBR11_21090 | Not Available | Negative | 5096333 - 5097700 | 51235.0 |
| fe-s oxidoreductase | DBR11_21095 | Not Available | Negative | 5097697 - 5098437 | 27533.5 |
| short chain dehydrogenase | DBR11_21100 | Not Available | Negative | 5098439 - 5099227 | 28141.8 |
| amidohydrolase | DBR11_21105 | Not Available | Negative | 5099237 - 5100067 | 31812.7 |
| ureidoglycolate lyase | DBR11_21110 | Not Available | Negative | 5100054 - 5100911 | 31304.2 |
| laci family transcriptional regulator | DBR11_21115 | Not Available | Positive | 5100922 - 5101931 | 36948.8 |
| hypothetical protein | DBR11_21120 | Not Available | Negative | 5102066 - 5102338 | 10580.7 |
| Trna-ser | Not Available | Not Available | Positive | 5106822 - 5106906 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

