Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DBR11_20570 | Not Available | Negative | 4969627 - 4971807 | 82321.5 |
| duf2490 domain-containing protein | DBR11_20575 | Not Available | Positive | 4971899 - 4972603 | 27892.6 |
| metallophosphoesterase | DBR11_20580 | Not Available | Negative | 4972660 - 4974072 | 53656.7 |
| hypothetical protein | DBR11_20585 | Not Available | Negative | 4974084 - 4975607 | 53487.8 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DBR11_20590 | Not Available | Negative | 4975619 - 4977154 | 57102.7 |
| susc/raga family tonb-linked outer membrane protein | DBR11_20595 | Not Available | Negative | 4977166 - 4980423 | 118695.0 |
| hypothetical protein | DBR11_20600 | Not Available | Negative | 4980730 - 4981746 | 38341.7 |
| hypothetical protein | DBR11_20605 | Not Available | Negative | 4981829 - 4982398 | 22267.7 |
| hypothetical protein | DBR11_20610 | Not Available | Positive | 4982550 - 4983473 | 34663.8 |
| hypothetical protein | DBR11_20615 | Not Available | Positive | 4983470 - 4986130 | 100643.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

