Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase family protein | DBR11_20360 | Not Available | Positive | 4920122 - 4921054 | 34267.5 |
| aldehyde dehydrogenase (nadp(+)) | DBR11_20365 | Not Available | Positive | 4921065 - 4922642 | 55780.8 |
| 4-hydroxyproline epimerase | DBR11_20370 | Not Available | Positive | 4922650 - 4923651 | 36585.8 |
| amino acid dehydrogenase | DBR11_20375 | Not Available | Positive | 4923691 - 4924935 | 44974.8 |
| laci family transcriptional regulator | DBR11_20380 | Not Available | Negative | 4925355 - 4926371 | 38353.2 |
| hypothetical protein | DBR11_20385 | Not Available | Positive | 4926827 - 4927813 | 37283.9 |
| tonb-dependent receptor | DBR11_20390 | Not Available | Positive | 4927951 - 4931159 | 119675.0 |
| hypothetical protein | DBR11_20395 | Not Available | Positive | 4931383 - 4931796 | 15048.3 |
| mannose-1-phosphate guanylyltransferase | DBR11_20400 | Not Available | Negative | 4931894 - 4932970 | 40947.0 |
| undecaprenyl-phosphate glucose phosphotransferase | DBR11_20405 | Not Available | Negative | 4933085 - 4934476 | 53701.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

