Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_20310 | Not Available | Negative | 4906945 - 4907217 | 10451.6 |
| anti-sigma factor | DBR11_20315 | Not Available | Positive | 4907476 - 4908645 | 43207.2 |
| hypothetical protein | DBR11_20320 | Not Available | Positive | 4908877 - 4909080 | 7678.65 |
| cytochrome-c peroxidase | DBR11_20325 | Not Available | Positive | 4909101 - 4910216 | 42054.8 |
| arac family transcriptional regulator | DBR11_20330 | Not Available | Negative | 4910246 - 4911091 | 32595.5 |
| gmc family oxidoreductase | DBR11_20335 | Not Available | Positive | 4911306 - 4912985 | 63200.8 |
| twin-arginine translocation pathway signal | DBR11_20340 | Not Available | Positive | 4912990 - 4913598 | 22275.1 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_20345 | Not Available | Negative | 4913774 - 4915375 | 59174.3 |
| susc/raga family tonb-linked outer membrane protein | DBR11_20350 | Not Available | Negative | 4915394 - 4918372 | 110524.0 |
| xaa-pro aminopeptidase | DBR11_20355 | Not Available | Positive | 4918675 - 4920021 | 49726.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

