Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_00135 | Not Available | Positive | 34194 - 34676 | 18384.1 |
| glutamate synthase large subunit | DBR11_00140 | Not Available | Positive | 34778 - 37594 | 102284.0 |
| glutamate synthase | DBR11_00145 | Not Available | Positive | 37598 - 39064 | 53607.3 |
| hypothetical protein | DBR11_00150 | Not Available | Positive | 39235 - 39795 | 21446.3 |
| hypothetical protein | DBR11_00155 | Not Available | Negative | 39853 - 40515 | 25247.7 |
| rna methyltransferase | DBR11_00160 | Not Available | Negative | 40526 - 41056 | 19620.6 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_00165 | Not Available | Negative | 41253 - 43022 | 66350.4 |
| susc/raga family protein | DBR11_00170 | Not Available | Negative | 43068 - 46595 | 130659.0 |
| hypothetical protein | DBR11_00175 | Not Available | Negative | 46783 - 47742 | 36596.8 |
| hypothetical protein | DBR11_00180 | Not Available | Negative | 47816 - 48376 | 22051.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

