Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | DBR11_20110 | Not Available | Positive | 4859734 - 4861524 | 67978.0 |
| dna-binding protein | DBR11_20115 | Not Available | Positive | 4861594 - 4861920 | 12787.9 |
| serine hydrolase | DBR11_20120 | Not Available | Positive | 4861985 - 4862905 | 33958.8 |
| hypothetical protein | DBR11_20125 | Not Available | Negative | 4862902 - 4863516 | 23794.3 |
| duf2723 domain-containing protein | DBR11_20130 | Not Available | Negative | 4863583 - 4866570 | 113297.0 |
| dna-binding response regulator | DBR11_20135 | Not Available | Negative | 4866658 - 4867383 | 27898.7 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_20140 | Not Available | Negative | 4867476 - 4868801 | 49363.8 |
| susc/raga family tonb-linked outer membrane protein | DBR11_20145 | Not Available | Negative | 4868812 - 4872174 | 124999.0 |
| metalloprotease | DBR11_20150 | Not Available | Negative | 4872213 - 4874852 | 100058.0 |
| hypothetical protein | DBR11_20155 | Not Available | Negative | 4875002 - 4876606 | 60591.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

