Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | DBR11_19805 | Not Available | Positive | 4796251 - 4798152 | 71984.3 |
| lysine transporter lyse | DBR11_19810 | Not Available | Negative | 4798205 - 4798831 | 23610.9 |
| mfs transporter | DBR11_19815 | Not Available | Positive | 4798981 - 4800411 | 51496.8 |
| cytidine deaminase | DBR11_19820 | Not Available | Positive | 4800508 - 4800954 | 16112.1 |
| gmp synthase (glutamine-hydrolyzing) | DBR11_19825 | Not Available | Positive | 4800965 - 4802494 | 56477.8 |
| amino acid abc transporter substrate-binding protein | DBR11_19830 | Not Available | Positive | 4802451 - 4803677 | 46668.3 |
| rna methyltransferase | DBR11_19835 | Not Available | Positive | 4803674 - 4804837 | 44277.3 |
| hypothetical protein | DBR11_19840 | Not Available | Negative | 4805002 - 4805571 | 20710.4 |
| amino acid transporter | DBR11_19845 | Not Available | Negative | 4805668 - 4807137 | 52801.3 |
| amino acid transporter | DBR11_19850 | Not Available | Negative | 4807186 - 4808631 | 51735.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

