Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-synthase | DBR11_19755 | Not Available | Positive | 4783533 - 4784884 | 49487.4 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DBR11_19760 | Not Available | Negative | 4784950 - 4786275 | 48197.9 |
| duf4290 domain-containing protein | DBR11_19765 | Not Available | Negative | 4786310 - 4786999 | 26740.7 |
| atp-dependent dna helicase | DBR11_19770 | Not Available | Negative | 4787112 - 4789424 | 87898.6 |
| hypothetical protein | DBR11_19775 | Not Available | Negative | 4789492 - 4790454 | 35941.4 |
| isoprenyl transferase | DBR11_19780 | Not Available | Positive | 4790650 - 4791390 | 28362.8 |
| outer membrane protein assembly factor bama | DBR11_19785 | Not Available | Positive | 4791504 - 4794014 | 93920.6 |
| hypothetical protein | DBR11_19790 | Not Available | Positive | 4794022 - 4794552 | 20438.7 |
| hypothetical protein | DBR11_19795 | Not Available | Positive | 4794597 - 4795172 | 20668.8 |
| glutamate racemase | DBR11_19800 | Not Available | Positive | 4795298 - 4796128 | 30979.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

