Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | DBR11_19645 | Not Available | Negative | 4758832 - 4759863 | 38764.3 |
| histone h1 | DBR11_19650 | Not Available | Positive | 4759940 - 4760080 | 5110.07 |
| dna polymerase iv | DBR11_19655 | Not Available | Positive | 4760178 - 4761281 | 41100.7 |
| beta-n-acetylhexosaminidase | DBR11_19660 | Not Available | Negative | 4761301 - 4763313 | 75148.7 |
| duf5009 domain-containing protein | DBR11_19670 | Not Available | Negative | 4763864 - 4764988 | 42219.9 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_19675 | Not Available | Negative | 4765018 - 4766802 | 65772.7 |
| susc/raga family tonb-linked outer membrane protein | DBR11_19680 | Not Available | Negative | 4766823 - 4770404 | 131646.0 |
| hypothetical protein | DBR11_19685 | Not Available | Negative | 4770553 - 4771605 | 39825.6 |
| hypothetical protein | DBR11_19690 | Not Available | Negative | 4771679 - 4772260 | 22450.2 |
| dna-binding response regulator | DBR11_19695 | Not Available | Positive | 4772345 - 4773028 | 26196.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

