Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein rfbh | DBR11_19540 | Not Available | Positive | 4736828 - 4738132 | 48521.6 |
| hypothetical protein | DBR11_19545 | Not Available | Positive | 4738252 - 4739379 | 43689.4 |
| hypothetical protein | DBR11_19550 | Not Available | Positive | 4739551 - 4740213 | 25212.3 |
| deor/glpr transcriptional regulator | DBR11_19555 | Not Available | Positive | 4740325 - 4741074 | 27609.4 |
| hypothetical protein | DBR11_19560 | Not Available | Positive | 4741175 - 4741546 | 14206.0 |
| hypothetical protein | DBR11_19565 | Not Available | Positive | 4741530 - 4743767 | 84850.6 |
| hypothetical protein | DBR11_19570 | Not Available | Negative | 4744049 - 4744777 | 28343.2 |
| hypothetical protein | DBR11_19575 | Not Available | Negative | 4744779 - 4745351 | 21971.6 |
| tonb-dependent receptor | DBR11_19580 | Not Available | Negative | 4745498 - 4748077 | 93501.9 |
| duf4262 domain-containing protein | DBR11_19585 | Not Available | Positive | 4748508 - 4749260 | 29322.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

