Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter atp-binding protein | DBR11_19285 | Not Available | Positive | 4680200 - 4681123 | 34055.6 |
| abc transporter permease | DBR11_19290 | Not Available | Positive | 4681215 - 4683485 | 84778.4 |
| dna mismatch repair protein | DBR11_19295 | Not Available | Positive | 4684732 - 4686138 | 52305.4 |
| peptidase m16 | DBR11_19300 | Not Available | Positive | 4686128 - 4688905 | 104167.0 |
| abc transporter permease | DBR11_19305 | Not Available | Positive | 4688916 - 4691207 | 84555.1 |
| glycerophosphodiester phosphodiesterase | DBR11_19310 | Not Available | Positive | 4691268 - 4692104 | 30684.9 |
| rna polymerase subunit sigma-24 | DBR11_19315 | Not Available | Negative | 4692085 - 4692636 | 21755.4 |
| glucose/galactose mfs transporter | DBR11_19320 | Not Available | Positive | 4693028 - 4694299 | 45344.3 |
| aquaporin | DBR11_19325 | Not Available | Negative | 4694269 - 4695009 | 25609.6 |
| glycerol kinase | DBR11_19330 | Not Available | Negative | 4695039 - 4696547 | 55008.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

