Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DBR11_01840 | Not Available | Negative | 460509 - 461561 | 39594.1 |
| peptide chain release factor n(5)-glutamine methyltransferase | DBR11_01845 | Not Available | Positive | 461610 - 462458 | 32194.7 |
| site-specific tyrosine recombinase xerd | DBR11_01850 | Not Available | Negative | 462470 - 463369 | 33834.3 |
| type ii 3-dehydroquinate dehydratase | DBR11_01855 | Not Available | Positive | 463414 - 463836 | 15607.6 |
| glycosyl transferase family 2 | DBR11_01860 | Not Available | Negative | 463839 - 464858 | 38691.5 |
| lauroyl acyltransferase | DBR11_01865 | Not Available | Negative | 464861 - 465739 | 34223.9 |
| hypothetical protein | DBR11_01870 | Not Available | Positive | 465778 - 466389 | 24265.7 |
| magnesium and cobalt transport protein cora | DBR11_01875 | Not Available | Positive | 466395 - 467513 | 43517.6 |
| magnesium transporter | DBR11_01880 | Not Available | Positive | 467559 - 468911 | 50082.1 |
| organic hydroperoxide resistance protein | DBR11_01885 | Not Available | Negative | 468952 - 469362 | 14365.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

