Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | DBR11_18420 | Not Available | Positive | 4468651 - 4470372 | 65303.5 |
| hypothetical protein | DBR11_18425 | Not Available | Positive | 4470460 - 4470675 | 8470.93 |
| hypothetical protein | DBR11_18430 | Not Available | Negative | 4470706 - 4471245 | 20674.9 |
| glycosyltransferase | DBR11_18435 | Not Available | Positive | 4471559 - 4472512 | 36528.7 |
| polysaccharide deacetylase | DBR11_18440 | Not Available | Positive | 4472493 - 4473266 | 30157.1 |
| phenylalanine 4-monooxygenase | DBR11_18445 | Not Available | Negative | 4473241 - 4473723 | 18606.9 |
| phenylacetic acid degradation protein | DBR11_18450 | Not Available | Negative | 4473751 - 4474809 | 40388.3 |
| tonb-dependent receptor | DBR11_18455 | Not Available | Positive | 4474949 - 4477741 | 103585.0 |
| glpgli family protein | DBR11_18460 | Not Available | Positive | 4477763 - 4478533 | 28520.9 |
| metallophosphoesterase | DBR11_18465 | Not Available | Positive | 4478623 - 4479771 | 43244.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

