Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_01740 | Not Available | Negative | 439067 - 439501 | 16012.6 |
| thioredoxin | DBR11_01745 | Not Available | Negative | 439613 - 440755 | 41537.8 |
| hypothetical protein | DBR11_01750 | Not Available | Negative | 440765 - 442213 | 53752.9 |
| hypothetical protein | DBR11_01755 | Not Available | Negative | 442194 - 443009 | 31271.5 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_01760 | Not Available | Negative | 443041 - 444555 | 57230.5 |
| susc/raga family tonb-linked outer membrane protein | DBR11_01765 | Not Available | Negative | 444559 - 447897 | 125196.0 |
| anti-sigma factor | DBR11_01770 | Not Available | Negative | 448140 - 449142 | 36406.5 |
| hypothetical protein | DBR11_01775 | Not Available | Positive | 449243 - 449680 | 16405.9 |
| sco family protein | DBR11_01780 | Not Available | Positive | 449677 - 450315 | 24556.7 |
| low affinity iron permease family protein | DBR11_01785 | Not Available | Positive | 450439 - 450909 | 18003.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

