Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron dicitrate transport regulator fecr | DBR11_18070 | Not Available | Negative | 4383080 - 4384048 | 36917.2 |
| rna polymerase sigma-70 factor | DBR11_18075 | Not Available | Negative | 4384053 - 4384625 | 22846.8 |
| fatty acid hydroxylase | DBR11_18080 | Not Available | Negative | 4384669 - 4385604 | 36557.6 |
| rna polymerase subunit sigma-70 | DBR11_18085 | Not Available | Positive | 4385787 - 4386347 | 22112.5 |
| hypothetical protein | DBR11_18090 | Not Available | Positive | 4386454 - 4387644 | 44476.2 |
| susc/raga family tonb-linked outer membrane protein | DBR11_18095 | Not Available | Positive | 4387883 - 4391176 | 121016.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_18100 | Not Available | Positive | 4391188 - 4392648 | 53232.4 |
| metallophosphoesterase | DBR11_18105 | Not Available | Positive | 4392655 - 4393773 | 42976.5 |
| urocanate hydratase | DBR11_18110 | Not Available | Negative | 4393824 - 4395836 | 74616.4 |
| imidazolonepropionase | DBR11_18115 | Not Available | Negative | 4395829 - 4397088 | 45260.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

