Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DBR11_18010 | Not Available | Positive | 4361544 - 4363061 | 55563.9 |
| hypothetical protein | DBR11_18015 | Not Available | Positive | 4363063 - 4364646 | 59847.0 |
| hypothetical protein | DBR11_18020 | Not Available | Negative | 4364666 - 4365781 | 41220.9 |
| hybrid sensor histidine kinase/response regulator | DBR11_18025 | Not Available | Negative | 4365887 - 4369978 | 154988.0 |
| susc/raga family protein | DBR11_18030 | Not Available | Positive | 4370174 - 4373149 | 108293.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_18035 | Not Available | Positive | 4373215 - 4374801 | 59022.0 |
| hypothetical protein | DBR11_18040 | Not Available | Positive | 4374817 - 4375929 | 39610.1 |
| arabinogalactan endo-1,4-beta-galactosidase | DBR11_18045 | Not Available | Positive | 4375937 - 4376992 | 38546.1 |
| membrane or secreted protein | DBR11_18050 | Not Available | Positive | 4377004 - 4379226 | 82931.2 |
| hypothetical protein | DBR11_18065 | Not Available | Negative | 4381423 - 4383069 | 60621.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

