Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucuronyl hydrolase | DBR11_17640 | Not Available | Positive | 4253063 - 4255009 | 72637.5 |
| pectate lyase | DBR11_17645 | Not Available | Positive | 4255011 - 4256036 | 38525.4 |
| altronate oxidoreductase | DBR11_17650 | Not Available | Positive | 4256150 - 4257616 | 54154.2 |
| altronate hydrolase | DBR11_17655 | Not Available | Positive | 4257613 - 4259265 | 58946.4 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DBR11_17660 | Not Available | Positive | 4259308 - 4260138 | 31205.2 |
| d-mannonate oxidoreductase | DBR11_17665 | Not Available | Positive | 4260138 - 4260953 | 28545.5 |
| glucuronate isomerase | DBR11_17670 | Not Available | Positive | 4260980 - 4262380 | 53811.9 |
| carbohydrate kinase | DBR11_17675 | Not Available | Positive | 4262382 - 4263410 | 37532.1 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DBR11_17680 | Not Available | Positive | 4263428 - 4264087 | 24246.6 |
| mfs transporter | DBR11_17685 | Not Available | Positive | 4264121 - 4265494 | 50488.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

