Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DBR11_01690 | Not Available | Negative | 422647 - 423936 | 47660.8 |
| glycosidase | DBR11_01695 | Not Available | Negative | 423926 - 424984 | 39458.1 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_01700 | Not Available | Negative | 425020 - 426507 | 55155.1 |
| susc/raga family tonb-linked outer membrane protein | DBR11_01705 | Not Available | Negative | 426532 - 429609 | 113703.0 |
| hypothetical protein | DBR11_01710 | Not Available | Negative | 429639 - 432143 | 95590.5 |
| histidine kinase | DBR11_01715 | Not Available | Negative | 432220 - 436359 | 157886.0 |
| hypothetical protein | DBR11_01720 | Not Available | Positive | 436469 - 436717 | 9456.13 |
| transcriptional regulator | DBR11_01725 | Not Available | Positive | 436762 - 437199 | 16293.1 |
| uroporphyrinogen-iii c-methyltransferase | DBR11_01730 | Not Available | Positive | 437289 - 438083 | 28296.0 |
| antibiotic biosynthesis monooxygenase | DBR11_01735 | Not Available | Negative | 438499 - 439017 | 19377.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

