Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4249 domain-containing protein | DBR11_17590 | Not Available | Negative | 4238764 - 4239594 | 30601.4 |
| hypothetical protein | DBR11_17595 | Not Available | Positive | 4239719 - 4240646 | 35836.7 |
| susc/raga family protein | DBR11_17600 | Not Available | Positive | 4240886 - 4243849 | 108758.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_17605 | Not Available | Positive | 4243867 - 4245501 | 60907.9 |
| pectin esterase | DBR11_17610 | Not Available | Positive | 4245513 - 4246466 | 35569.1 |
| glycoside hydrolase | DBR11_17615 | Not Available | Positive | 4246463 - 4248115 | 60940.3 |
| oxalate decarboxylase | DBR11_17620 | Not Available | Positive | 4248318 - 4249352 | 37930.8 |
| hypothetical protein | DBR11_17625 | Not Available | Negative | 4249507 - 4250217 | 26564.2 |
| polyisoprenoid-binding protein | DBR11_17630 | Not Available | Negative | 4250627 - 4251208 | 20824.8 |
| glycoside hydrolase | DBR11_17635 | Not Available | Positive | 4251396 - 4253057 | 60457.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

