Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_17485 | Not Available | Positive | 4214258 - 4215568 | 49188.5 |
| hypothetical protein | DBR11_17490 | Not Available | Positive | 4215558 - 4216253 | 25995.2 |
| hypothetical protein | DBR11_17495 | Not Available | Positive | 4216646 - 4216933 | 10987.5 |
| translation initiation factor if-2 | DBR11_17500 | Not Available | Negative | 4217999 - 4221067 | 111264.0 |
| transcription termination/antitermination protein nusa | DBR11_17505 | Not Available | Negative | 4221197 - 4222432 | 46736.7 |
| hypothetical protein | DBR11_17515 | Not Available | Negative | 4223050 - 4223454 | 14388.5 |
| phage holin family protein | DBR11_17520 | Not Available | Positive | 4223503 - 4223841 | 11806.3 |
| acyl-coa dehydrogenase | DBR11_17525 | Not Available | Negative | 4223887 - 4225026 | 41596.9 |
| aspartate 1-decarboxylase | DBR11_17530 | Not Available | Negative | 4225130 - 4225480 | 12937.7 |
| pantoate--beta-alanine ligase | DBR11_17535 | Not Available | Negative | 4225527 - 4226366 | 31226.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

