Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endo-1,4-beta-xylanase | DBR11_17385 | Not Available | Negative | 4197972 - 4198808 | 30577.2 |
| hypothetical protein | DBR11_17390 | Not Available | Negative | 4198854 - 4199498 | 22807.2 |
| hypothetical protein | DBR11_17395 | Not Available | Negative | 4199570 - 4200937 | 52732.3 |
| hypothetical protein | DBR11_17400 | Not Available | Negative | 4200949 - 4202427 | 55048.3 |
| rna polymerase sigma-70 factor | DBR11_17405 | Not Available | Positive | 4202428 - 4202650 | 8560.61 |
| hypothetical protein | DBR11_17410 | Not Available | Positive | 4202715 - 4203890 | 44128.5 |
| susc/raga family tonb-linked outer membrane protein | DBR11_17415 | Not Available | Positive | 4204041 - 4207463 | 127561.0 |
| hypothetical protein | DBR11_17420 | Not Available | Positive | 4207475 - 4208989 | 56285.2 |
| hypothetical protein | DBR11_17425 | Not Available | Positive | 4208997 - 4209692 | 26097.8 |
| anti-sigma factor | DBR11_17430 | Not Available | Negative | 4209756 - 4210033 | 11082.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

