Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DBR11_17180 | Not Available | Positive | 4162367 - 4163527 | 41945.9 |
| rip metalloprotease rsep | DBR11_17185 | Not Available | Positive | 4163566 - 4164897 | 48943.6 |
| acyl-coa reductase | DBR11_17190 | Not Available | Positive | 4165041 - 4166063 | 38672.2 |
| hypothetical protein | DBR11_17195 | Not Available | Positive | 4166099 - 4168012 | 68586.5 |
| fructose-6-phosphate aldolase | DBR11_17200 | Not Available | Positive | 4168050 - 4168253 | 7755.74 |
| phosphonate abc transporter atp-binding protein | DBR11_17205 | Not Available | Positive | 4168256 - 4168939 | 25235.7 |
| nucleotide exchange factor grpe | DBR11_17210 | Not Available | Positive | 4169065 - 4169652 | 21601.4 |
| molecular chaperone dnaj | DBR11_17215 | Not Available | Positive | 4169657 - 4170746 | 38554.7 |
| glyoxalase | DBR11_17220 | Not Available | Negative | 4170802 - 4171215 | 15572.7 |
| endonuclease | DBR11_17225 | Not Available | Negative | 4171484 - 4172075 | 22046.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

