Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_01640 | Not Available | Negative | 405213 - 405644 | 15135.3 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DBR11_01645 | Not Available | Negative | 405676 - 407130 | 52952.2 |
| susc/raga family tonb-linked outer membrane protein | DBR11_01650 | Not Available | Negative | 407135 - 410170 | 110270.0 |
| ragb/susd family protein | DBR11_01655 | Not Available | Negative | 410445 - 411737 | 46463.4 |
| susc/raga family tonb-linked outer membrane protein | DBR11_01660 | Not Available | Negative | 411756 - 414926 | 114326.0 |
| deor family transcriptional regulator | DBR11_01665 | Not Available | Positive | 415161 - 415907 | 27608.7 |
| glucosamine-6-phosphate deaminase | DBR11_01670 | Not Available | Positive | 416030 - 417949 | 72581.5 |
| duf5009 domain-containing protein | DBR11_01675 | Not Available | Positive | 417953 - 419095 | 42849.9 |
| glycoside hydrolase | DBR11_01680 | Not Available | Negative | 419133 - 420665 | 58107.9 |
| hypothetical protein | DBR11_01685 | Not Available | Negative | 420927 - 422636 | 63903.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

