Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell envelope biogenesis protein ompa | DBR11_16880 | Not Available | Negative | 4089946 - 4093260 | 118994.0 |
| hypothetical protein | DBR11_16885 | Not Available | Positive | 4093379 - 4093998 | 23538.8 |
| hypothetical protein | DBR11_16890 | Not Available | Negative | 4094046 - 4094252 | 7667.01 |
| polyphosphate kinase 1 | DBR11_16895 | Not Available | Positive | 4095094 - 4097151 | 79591.9 |
| exopolyphosphatase | DBR11_16900 | Not Available | Positive | 4097156 - 4098037 | 32954.9 |
| phosphopantetheinyl transferase | DBR11_16905 | Not Available | Negative | 4098034 - 4098513 | 18116.8 |
| acyl carrier protein | DBR11_16910 | Not Available | Negative | 4098494 - 4098757 | 9949.86 |
| beta-ketoacyl-acp synthase | DBR11_16915 | Not Available | Negative | 4098754 - 4100028 | 45084.9 |
| hydroxymyristoyl-acp dehydratase | DBR11_16920 | Not Available | Negative | 4100021 - 4100467 | 16344.9 |
| type iii polyketide synthase | DBR11_16925 | Not Available | Negative | 4100484 - 4101536 | 38970.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

