Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-carboxy-7-deazaguanine synthase quee | DBR11_16780 | Not Available | Negative | 4067627 - 4068250 | 23436.0 |
| (2fe-2s)-binding protein | DBR11_16785 | Not Available | Positive | 4068351 - 4068689 | 12741.3 |
| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase | DBR11_16790 | Not Available | Negative | 4068699 - 4069580 | 31685.6 |
| elongation factor 4 | DBR11_16795 | Not Available | Negative | 4069602 - 4071389 | 66836.2 |
| copper homeostasis protein cutc | DBR11_16800 | Not Available | Negative | 4071459 - 4072199 | 26691.2 |
| glycosylasparaginase | DBR11_16805 | Not Available | Negative | 4072220 - 4073236 | 36595.1 |
| nitrilase family protein | DBR11_16810 | Not Available | Negative | 4073244 - 4074035 | 30676.6 |
| methionine aminotransferase | DBR11_16815 | Not Available | Negative | 4074085 - 4075230 | 43355.2 |
| hypothetical protein | DBR11_16820 | Not Available | Positive | 4075333 - 4076103 | 28630.8 |
| heme oxygenase | DBR11_16825 | Not Available | Positive | 4076149 - 4076943 | 29973.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

