Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_01590 | Not Available | Negative | 387747 - 391202 | 128326.0 |
| hypothetical protein | DBR11_01595 | Not Available | Positive | 391511 - 393604 | 80911.0 |
| hypothetical protein | DBR11_01600 | Not Available | Positive | 393591 - 394424 | 32747.1 |
| hypothetical protein | DBR11_01605 | Not Available | Negative | 394526 - 394942 | 15569.2 |
| hypothetical protein | DBR11_01610 | Not Available | Negative | 394935 - 395525 | 22508.0 |
| atp-dependent helicase | DBR11_01615 | Not Available | Negative | 395634 - 397514 | 71447.5 |
| atp-dependent endonuclease | DBR11_01620 | Not Available | Negative | 397511 - 399706 | 82871.0 |
| n-acetylmuramoyl-l-alanine amidase | DBR11_01625 | Not Available | Negative | 399778 - 400347 | 21646.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DBR11_01630 | Not Available | Negative | 400403 - 402007 | 59451.2 |
| susc/raga family tonb-linked outer membrane protein | DBR11_01635 | Not Available | Negative | 402025 - 405075 | 109564.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

