Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_16575 | Not Available | Positive | 4014276 - 4017629 | 123845.0 |
| hypothetical protein | DBR11_16580 | Not Available | Positive | 4017644 - 4019290 | 61827.2 |
| carbohydrate-binding protein | DBR11_16585 | Not Available | Positive | 4019331 - 4020734 | 53778.9 |
| nickel transport complex protein, nikm subunit, transmembrane | DBR11_16590 | Not Available | Positive | 4021149 - 4021871 | 26433.1 |
| tonb-dependent siderophore receptor | DBR11_16595 | Not Available | Positive | 4021880 - 4024243 | 86932.7 |
| rna polymerase sigma-70 factor | DBR11_16600 | Not Available | Positive | 4024972 - 4025556 | 22944.6 |
| hypothetical protein | DBR11_16605 | Not Available | Positive | 4025681 - 4026679 | 38233.1 |
| tonb-dependent siderophore receptor | DBR11_16610 | Not Available | Positive | 4026764 - 4029481 | 99594.5 |
| pepsy domain-containing protein | DBR11_16615 | Not Available | Positive | 4029462 - 4030568 | 42627.4 |
| chromate transporter | DBR11_16620 | Not Available | Negative | 4030589 - 4031905 | 48912.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

