Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron transporter | DBR11_16125 | Not Available | Positive | 3917462 - 3918151 | 24724.8 |
| hypothetical protein | DBR11_16130 | Not Available | Positive | 3918209 - 3918811 | 23318.3 |
| sterol desaturase family protein | DBR11_16135 | Not Available | Positive | 3918899 - 3919641 | 29411.1 |
| rna polymerase sigma-70 factor | DBR11_16140 | Not Available | Positive | 3919720 - 3920301 | 23138.0 |
| anti-sigma factor | DBR11_16145 | Not Available | Positive | 3920378 - 3921535 | 43375.9 |
| susc/raga family tonb-linked outer membrane protein | DBR11_16150 | Not Available | Positive | 3921765 - 3925250 | 129767.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_16155 | Not Available | Positive | 3925272 - 3927206 | 73018.7 |
| hypothetical protein | DBR11_16160 | Not Available | Positive | 3927229 - 3928452 | 45007.6 |
| hypothetical protein | DBR11_16165 | Not Available | Positive | 3928498 - 3929706 | 44915.0 |
| glycoside hydrolase | DBR11_16170 | Not Available | Positive | 3929863 - 3932199 | 86679.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

