Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | DBR11_01540 | Not Available | Negative | 369667 - 371517 | 69177.5 |
| beta-1,3-glucosyltransferase | DBR11_01545 | Not Available | Negative | 371572 - 374193 | 96619.2 |
| alpha-l-fucosidase | DBR11_01550 | Not Available | Negative | 374295 - 375737 | 54953.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DBR11_01555 | Not Available | Negative | 375819 - 377426 | 59413.0 |
| susc/raga family tonb-linked outer membrane protein | DBR11_01560 | Not Available | Negative | 377448 - 380714 | 119297.0 |
| sugar kinase | DBR11_01565 | Not Available | Negative | 380789 - 381982 | 42546.8 |
| hypothetical protein | DBR11_01570 | Not Available | Negative | 382110 - 382796 | 25995.3 |
| arac family transcriptional regulator | DBR11_01575 | Not Available | Negative | 382869 - 383732 | 33235.0 |
| hypothetical protein | DBR11_01580 | Not Available | Positive | 383826 - 384353 | 20155.8 |
| hypothetical protein | DBR11_01585 | Not Available | Negative | 384561 - 387734 | 117330.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

