Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | DBR11_15925 | Not Available | Negative | 3852622 - 3853593 | 34955.4 |
| crp/fnr family transcriptional regulator | DBR11_15930 | Not Available | Negative | 3853692 - 3854276 | 22981.7 |
| hypothetical protein | DBR11_15935 | Not Available | Negative | 3854497 - 3854919 | 15867.2 |
| transcription initiation protein | DBR11_15940 | Not Available | Positive | 3855036 - 3855377 | 12735.3 |
| rna polymerase subunit sigma | DBR11_15945 | Not Available | Positive | 3855377 - 3856630 | 48103.6 |
| duf4397 domain-containing protein | DBR11_15950 | Not Available | Negative | 3856668 - 3857354 | 24003.4 |
| hypothetical protein | DBR11_15955 | Not Available | Positive | 3857468 - 3859348 | 71512.6 |
| hypothetical protein | DBR11_15960 | Not Available | Negative | 3859468 - 3860163 | 25622.9 |
| beta-galactosidase | DBR11_15965 | Not Available | Negative | 3860552 - 3863026 | 92647.1 |
| beta-glucanase | DBR11_15970 | Not Available | Negative | 3863044 - 3863826 | 30008.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

