Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_15770 | Not Available | Positive | 3822140 - 3822835 | 26615.6 |
| doxx family protein | DBR11_15775 | Not Available | Positive | 3822838 - 3823989 | 43012.1 |
| abc transporter permease | DBR11_15780 | Not Available | Positive | 3823992 - 3825047 | 39173.6 |
| shikimate kinase | DBR11_15785 | Not Available | Positive | 3825052 - 3825558 | 18639.4 |
| acyl-coa thioesterase | DBR11_15790 | Not Available | Negative | 3825573 - 3825769 | 7402.8 |
| doxx family protein | DBR11_15795 | Not Available | Negative | 3825838 - 3826293 | 16742.2 |
| beta-n-acetylhexosaminidase | DBR11_15805 | Not Available | Negative | 3827027 - 3828928 | 71861.8 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | DBR11_15810 | Not Available | Negative | 3829069 - 3830481 | 50954.8 |
| aspartate-semialdehyde dehydrogenase | DBR11_15815 | Not Available | Negative | 3830559 - 3831551 | 36353.1 |
| sugar phosphate isomerase/epimerase | DBR11_15820 | Not Available | Negative | 3831623 - 3832501 | 32833.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

