Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein | DBR11_15720 | Not Available | Negative | 3810857 - 3812293 | 52487.5 |
| glycine dehydrogenase (aminomethyl-transferring) | DBR11_15725 | Not Available | Negative | 3812561 - 3815440 | 105180.0 |
| hypothetical protein | DBR11_15730 | Not Available | Negative | 3815522 - 3816094 | 21393.1 |
| pyridoxine 5'-phosphate synthase | DBR11_15735 | Not Available | Negative | 3816106 - 3816825 | 26587.7 |
| polysaccharide deacetylase | DBR11_15740 | Not Available | Positive | 3816902 - 3817843 | 35195.8 |
| adenosylhomocysteinase | DBR11_15745 | Not Available | Negative | 3817877 - 3819193 | 48316.9 |
| brxa/brxb family bacilliredoxin | DBR11_15750 | Not Available | Positive | 3819501 - 3819911 | 14936.1 |
| polyketide cyclase | DBR11_15755 | Not Available | Negative | 3819964 - 3820500 | 20211.8 |
| tigr00159 family protein | DBR11_15760 | Not Available | Negative | 3820555 - 3821346 | 29783.0 |
| dihydropteroate synthase | DBR11_15765 | Not Available | Negative | 3821380 - 3822237 | 31876.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

