Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DBR11_15670 | Not Available | Negative | 3797930 - 3799141 | 44235.4 |
| permease | DBR11_15675 | Not Available | Negative | 3799266 - 3800711 | 54424.3 |
| hypothetical protein | DBR11_15680 | Not Available | Negative | 3800742 - 3801122 | 14836.5 |
| Trna-met | Not Available | Not Available | Positive | 3801258 - 3801331 | Not Available |
| dknyy family protein | DBR11_15690 | Not Available | Negative | 3801386 - 3803149 | 66935.1 |
| hypothetical protein | DBR11_15695 | Not Available | Negative | 3803307 - 3804410 | 39851.6 |
| hypothetical protein | DBR11_15700 | Not Available | Positive | 3804622 - 3808715 | 132827.0 |
| succinyl-coa--3-ketoacid-coa transferase | DBR11_15705 | Not Available | Positive | 3808861 - 3809562 | 25448.7 |
| succinyl-coa--3-ketoacid-coa transferase | DBR11_15710 | Not Available | Positive | 3809570 - 3810229 | 23319.6 |
| uridine kinase | DBR11_15715 | Not Available | Negative | 3810226 - 3810867 | 24609.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

