Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rela/spot family protein | DBR11_15620 | Not Available | Positive | 3781291 - 3783504 | 84008.7 |
| transcriptional repressor | DBR11_15625 | Not Available | Positive | 3783568 - 3784056 | 18984.7 |
| aspartate aminotransferase family protein | DBR11_15630 | Not Available | Positive | 3784206 - 3785549 | 49769.2 |
| susc/raga family tonb-linked outer membrane protein | DBR11_15635 | Not Available | Positive | 3785670 - 3788747 | 113266.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_15640 | Not Available | Positive | 3788793 - 3790541 | 65933.2 |
| hypothetical protein | DBR11_15645 | Not Available | Positive | 3790560 - 3792182 | 61580.8 |
| mfs transporter | DBR11_15650 | Not Available | Negative | 3792202 - 3793350 | 41569.9 |
| alpha/beta hydrolase | DBR11_15655 | Not Available | Negative | 3793347 - 3794291 | 34774.4 |
| transcriptional regulator | DBR11_15660 | Not Available | Positive | 3794384 - 3794779 | 15106.6 |
| translocation/assembly module tamb | DBR11_15665 | Not Available | Positive | 3794804 - 3797924 | 114829.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

