Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_15520 | Not Available | Negative | 3753836 - 3754549 | 25270.2 |
| transcription-repair coupling factor | DBR11_15525 | Not Available | Negative | 3754702 - 3755001 | 11510.8 |
| gdp-mannose pyrophosphatase nudk | DBR11_15530 | Not Available | Negative | 3755039 - 3755614 | 21857.1 |
| alpha-galactosidase | DBR11_15535 | Not Available | Negative | 3755649 - 3758309 | 97808.7 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_15540 | Not Available | Negative | 3758379 - 3759920 | 57574.6 |
| susc/raga family tonb-linked outer membrane protein | DBR11_15545 | Not Available | Negative | 3759939 - 3763028 | 111210.0 |
| solute:sodium symporter family transporter | DBR11_15550 | Not Available | Negative | 3763222 - 3764823 | 58895.2 |
| gntr family transcriptional regulator | DBR11_15555 | Not Available | Negative | 3764826 - 3765842 | 38660.0 |
| peptide-n-glycosidase | DBR11_15560 | Not Available | Negative | 3765924 - 3767603 | 62469.7 |
| n-acyl-d-glucosamine 2-epimerase | DBR11_15565 | Not Available | Negative | 3767629 - 3768798 | 44490.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

