Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | DBR11_15470 | Not Available | Positive | 3745127 - 3745645 | 19180.3 |
| flavin reductase | DBR11_15475 | Not Available | Negative | 3745642 - 3746535 | 32849.8 |
| fumarylacetoacetate hydrolase | DBR11_15480 | Not Available | Negative | 3746535 - 3747530 | 36629.9 |
| homogentisate 1,2-dioxygenase | DBR11_15485 | Not Available | Positive | 3747928 - 3749094 | 44738.1 |
| 4-hydroxyphenylpyruvate dioxygenase | DBR11_15490 | Not Available | Positive | 3749161 - 3750291 | 42558.4 |
| ribonuclease | DBR11_15495 | Not Available | Positive | 3750471 - 3751379 | 34708.6 |
| hypothetical protein | DBR11_15500 | Not Available | Negative | 3751376 - 3751651 | 10512.6 |
| port family protein | DBR11_15505 | Not Available | Negative | 3751836 - 3752423 | 20714.8 |
| peptidylprolyl isomerase | DBR11_15510 | Not Available | Positive | 3752536 - 3753042 | 18080.8 |
| hypothetical protein | DBR11_15515 | Not Available | Negative | 3753086 - 3753763 | 24221.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

