Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb superfamily protein | DBR11_15415 | Not Available | Positive | 3733202 - 3733648 | 17294.0 |
| fis family transcriptional regulator | DBR11_15425 | Not Available | Positive | 3734134 - 3735537 | 52457.0 |
| chloride channel protein | DBR11_15430 | Not Available | Negative | 3735593 - 3737380 | 65321.1 |
| rna pseudouridine synthase | DBR11_15435 | Not Available | Negative | 3737391 - 3738113 | 27735.4 |
| dna-binding response regulator | DBR11_15440 | Not Available | Negative | 3738142 - 3738831 | 25988.7 |
| thioredoxin | DBR11_15445 | Not Available | Negative | 3738937 - 3740046 | 41261.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit b | DBR11_15450 | Not Available | Negative | 3740062 - 3741525 | 53936.4 |
| hypothetical protein | DBR11_15455 | Not Available | Positive | 3741694 - 3742212 | 20087.4 |
| aromatic amino acid hydroxylase | DBR11_15460 | Not Available | Positive | 3742558 - 3744342 | 67471.2 |
| short-chain dehydrogenase | DBR11_15465 | Not Available | Positive | 3744346 - 3745047 | 25096.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

