Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4271 domain-containing protein | DBR11_15155 | Not Available | Negative | 3677781 - 3678300 | 20031.7 |
| dna helicase | DBR11_15160 | Not Available | Negative | 3678343 - 3679501 | 44622.7 |
| hypothetical protein | DBR11_15165 | Not Available | Positive | 3679743 - 3679949 | 7792.63 |
| thioredoxin-dependent thiol peroxidase | DBR11_15170 | Not Available | Negative | 3680070 - 3680531 | 16985.3 |
| m23 family peptidase | DBR11_15175 | Not Available | Negative | 3680539 - 3682263 | 64095.9 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | DBR11_15180 | Not Available | Negative | 3682269 - 3682880 | 23053.7 |
| t9ss c-terminal target domain-containing protein | DBR11_15185 | Not Available | Negative | 3683019 - 3683474 | 16885.7 |
| potassium transporter kup | DBR11_15190 | Not Available | Positive | 3683728 - 3685680 | 73209.8 |
| amino acid permease | DBR11_15195 | Not Available | Negative | 3685714 - 3687663 | 71354.0 |
| m3 family oligoendopeptidase | DBR11_15200 | Not Available | Negative | 3687716 - 3689431 | 66276.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

