Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | DBR11_01440 | Not Available | Positive | 341632 - 342117 | 18992.7 |
| alpha-mannosidase | DBR11_01445 | Not Available | Negative | 342293 - 344587 | 85819.3 |
| transcriptional regulator | DBR11_01450 | Not Available | Negative | 344641 - 345531 | 32470.9 |
| metal-independent alpha-mannosidase | DBR11_01455 | Not Available | Negative | 345606 - 347024 | 53343.7 |
| laci family transcriptional regulator | DBR11_01460 | Not Available | Negative | 347229 - 348239 | 37637.6 |
| l-fucose:h+ symporter permease | DBR11_01465 | Not Available | Negative | 348359 - 349588 | 44972.7 |
| alpha-l-fucosidase | DBR11_01470 | Not Available | Negative | 349599 - 351071 | 57045.4 |
| alpha-1,6-mannanase | DBR11_01475 | Not Available | Negative | 351121 - 352281 | 43687.4 |
| hypothetical protein | DBR11_01480 | Not Available | Negative | 352341 - 353459 | 41116.9 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_01485 | Not Available | Negative | 353478 - 355091 | 60858.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

