Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna epoxyqueuosine(34) reductase queg | DBR11_15055 | Not Available | Negative | 3654731 - 3655669 | 35881.1 |
| hypothetical protein | DBR11_15060 | Not Available | Positive | 3655750 - 3655956 | 7737.33 |
| carbon-nitrogen hydrolase | DBR11_15065 | Not Available | Negative | 3655961 - 3657469 | 57606.2 |
| holliday junction branch migration dna helicase ruvb | DBR11_15070 | Not Available | Negative | 3657482 - 3658504 | 37684.3 |
| 3-hydroxybutyryl-coa dehydrogenase | DBR11_15075 | Not Available | Negative | 3658535 - 3659425 | 31764.8 |
| pyridoxamine 5'-phosphate oxidase | DBR11_15080 | Not Available | Negative | 3659451 - 3660101 | 24844.1 |
| hypothetical protein | DBR11_15085 | Not Available | Positive | 3660152 - 3660715 | 21048.6 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DBR11_15090 | Not Available | Negative | 3660725 - 3661213 | 17145.9 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DBR11_15095 | Not Available | Negative | 3661213 - 3662352 | 42585.3 |
| aminoacetone oxidase family fad-binding enzyme | DBR11_15100 | Not Available | Positive | 3662409 - 3663599 | 43489.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

