Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DBR11_15005 | Not Available | Negative | 3640340 - 3641578 | 45680.7 |
| aminofutalosine synthase mqne | DBR11_15010 | Not Available | Positive | 3641954 - 3643147 | 46152.0 |
| histidine phosphatase family protein | DBR11_15015 | Not Available | Positive | 3643147 - 3643782 | 23864.3 |
| radical sam protein | DBR11_15020 | Not Available | Positive | 3643769 - 3644497 | 27274.8 |
| dna mismatch repair protein muts | DBR11_15025 | Not Available | Positive | 3644589 - 3647198 | 97742.8 |
| hydrolase | DBR11_15030 | Not Available | Positive | 3647199 - 3647693 | 18105.8 |
| hypothetical protein | DBR11_15035 | Not Available | Negative | 3647828 - 3649729 | 72690.6 |
| duf3857 domain-containing protein | DBR11_15040 | Not Available | Negative | 3649731 - 3651713 | 75463.2 |
| dna polymerase iii subunit epsilon | DBR11_15045 | Not Available | Positive | 3651865 - 3652836 | 37024.1 |
| peptidase | DBR11_15050 | Not Available | Positive | 3652843 - 3654717 | 71007.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

